PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHN44989.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family bHLH
Protein Properties Length: 367aa    MW: 40322.6 Da    PI: 6.0649
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHN44989.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH36.68.3e-12218264455
                 HHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   4 ahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 
                 +h e+Er+RR+++N++f  Lr ++P+ +      K++Ka+ L  A+ +I +Lq
  KHN44989.1 218 NHVEAERQRREKLNQRFYALRAVVPNiS------KMDKASLLGDAITFITDLQ 264
                 799***********************66......*****************99 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF142158.8E-20188IPR025610Transcription factor MYC/MYB N-terminal
PROSITE profilePS5088816.259214263IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000837.46E-14217268No hitNo description
SuperFamilySSF474596.15E-18217284IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.3E-17218284IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000102.2E-9218264IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003535.6E-13220269IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd048733.05E-4298365No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 367 aa     Download sequence    Send to blast
MFYLSSMCYI FGFDSPCGPG SSFKSGKLIW ASDAAGCLNQ LESRSFMGKL AGLQTVVFVP  60
LKSGVVELGS LEMVPEEHGV VEMVRTAFGE SSPGQAKVFP KIFGHELSLG DTKSQSITIS  120
FSPKVEDDPG FTSDSYEVQA LGVNHAYGNS SNGTLGVSNE GKMFPQLNQM MAGNFNAQGS  180
GVPCLDLGNE DSSSIHADER KPRKRGRKPA NGREEPLNHV EAERQRREKL NQRFYALRAV  240
VPNISKMDKA SLLGDAITFI TDLQMKIKVL EAEKNMIHNQ DQKLSLPDMD FQEREDETVV  300
TVRCPLDIHP VSNVVKTFKE HQIVAQDSSV STTDDKIIHT FSIRTEGGET AAIQLKEKLE  360
ASLSKNR
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1199207RKPRKRGRK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150410.0AP015041.1 Vigna angularis var. angularis DNA, chromosome 8, almost complete sequence, cultivar: Shumari.
GenBankAP0156800.0AP015680.1 Vigna angularis var. angularis DNA, scaffold: Scaffold_0636, complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006594010.10.0PREDICTED: transcription factor bHLH3-like
SwissprotO234871e-121BH003_ARATH; Transcription factor bHLH3
TrEMBLA0A0B2SKX80.0A0A0B2SKX8_GLYSO; Transcription factor bHLH3
STRINGGLYMA13G18131.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF82633445
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G16430.11e-123bHLH family protein
Publications ? help Back to Top
  1. Qi X, et al.
    Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing.
    Nat Commun, 2014. 5: p. 4340
    [PMID:25004933]